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Cluster: HRGMv2_1023_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1023_2 HRGMv2_1023_2_49 48366 50099 - GH13_30
STP HRGMv2_1023_2 HRGMv2_1023_2_50 50461 51207 - STAS
STP HRGMv2_1023_2 HRGMv2_1023_2_51 51288 53633 - GAF | SpoIIE
TC HRGMv2_1023_2 HRGMv2_1023_2_52 54375 55403 - 3.A.1.5.36
TC HRGMv2_1023_2 HRGMv2_1023_2_53 55403 56494 - 3.A.1.5.34
TC HRGMv2_1023_2 HRGMv2_1023_2_54 56497 57432 - 3.A.1.5.11
TC HRGMv2_1023_2 HRGMv2_1023_2_55 57447 58484 - 3.A.1.5.37
TC HRGMv2_1023_2 HRGMv2_1023_2_56 58641 60317 - 3.A.1.5.35
Gene ID: HRGMv2_1023_2_49
Type: CAZyme
Location: 48366 - 50099 (-)
Gene ID: HRGMv2_1023_2_50
Type: STP
Location: 50461 - 51207 (-)
Gene ID: HRGMv2_1023_2_51
Type: STP
Location: 51288 - 53633 (-)
Gene ID: HRGMv2_1023_2_52
Type: TC
Location: 54375 - 55403 (-)
Gene ID: HRGMv2_1023_2_53
Type: TC
Location: 55403 - 56494 (-)
Gene ID: HRGMv2_1023_2_54
Type: TC
Location: 56497 - 57432 (-)
Gene ID: HRGMv2_1023_2_55
Type: TC
Location: 57447 - 58484 (-)
Gene ID: HRGMv2_1023_2_56
Type: TC
Location: 58641 - 60317 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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