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Cluster: HRGMv2_1022_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1022_2 HRGMv2_1022_2_18 16316 16759 + 4.A.6.1.16
pfam HRGMv2_1022_2 HRGMv2_1022_2_19 16759 17040 + YajC
TC HRGMv2_1022_2 HRGMv2_1022_2_20 17077 17559 + 4.A.6.1.4
TC HRGMv2_1022_2 HRGMv2_1022_2_21 17650 18450 + 4.A.6.1.4
TC HRGMv2_1022_2 HRGMv2_1022_2_22 18440 19522 + 4.A.6.1.4
TF HRGMv2_1022_2 HRGMv2_1022_2_23 19707 20438 + GntR
STP HRGMv2_1022_2 HRGMv2_1022_2_24 20553 21719 + SIS | SIS
CAZyme HRGMv2_1022_2 HRGMv2_1022_2_25 21838 23007 + CE9
Gene ID: HRGMv2_1022_2_18
Type: TC
Location: 16316 - 16759 (+)
Gene ID: HRGMv2_1022_2_19
Type: pfam
Location: 16759 - 17040 (+)
Gene ID: HRGMv2_1022_2_20
Type: TC
Location: 17077 - 17559 (+)
Gene ID: HRGMv2_1022_2_21
Type: TC
Location: 17650 - 18450 (+)
Gene ID: HRGMv2_1022_2_22
Type: TC
Location: 18440 - 19522 (+)
Gene ID: HRGMv2_1022_2_23
Type: TF
Location: 19707 - 20438 (+)
Gene ID: HRGMv2_1022_2_24
Type: STP
Location: 20553 - 21719 (+)
Gene ID: HRGMv2_1022_2_25
Type: CAZyme
Location: 21838 - 23007 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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