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Cluster: HRGMv2_1022_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1022_28 HRGMv2_1022_28_16 18337 19737 + GH1
TC HRGMv2_1022_28 HRGMv2_1022_28_17 19858 21201 + 4.A.3.2.2
TC HRGMv2_1022_28 HRGMv2_1022_28_18 21363 21665 + 4.A.3.2.9
TC HRGMv2_1022_28 HRGMv2_1022_28_19 21675 22007 + 4.A.3.2.3
STP HRGMv2_1022_28 HRGMv2_1022_28_20 22249 23202 + Glucokinase
pfam HRGMv2_1022_28 HRGMv2_1022_28_21 23371 24294 + DHH | DHHA2
TC HRGMv2_1022_28 HRGMv2_1022_28_22 24562 25920 + 2.A.33.1.1
Gene ID: HRGMv2_1022_28_16
Type: CAZyme
Location: 18337 - 19737 (+)
Gene ID: HRGMv2_1022_28_17
Type: TC
Location: 19858 - 21201 (+)
Gene ID: HRGMv2_1022_28_18
Type: TC
Location: 21363 - 21665 (+)
Gene ID: HRGMv2_1022_28_19
Type: TC
Location: 21675 - 22007 (+)
Gene ID: HRGMv2_1022_28_20
Type: STP
Location: 22249 - 23202 (+)
Gene ID: HRGMv2_1022_28_21
Type: pfam
Location: 23371 - 24294 (+)
Gene ID: HRGMv2_1022_28_22
Type: TC
Location: 24562 - 25920 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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