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Cluster: HRGMv2_1021_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1021_4 HRGMv2_1021_4_114 117697 119904 - GH13_30
STP HRGMv2_1021_4 HRGMv2_1021_4_115 120016 120762 - STAS
STP HRGMv2_1021_4 HRGMv2_1021_4_116 120841 123186 - GAF | SpoIIE
TC HRGMv2_1021_4 HRGMv2_1021_4_117 123932 124960 - 3.A.1.5.36
TC HRGMv2_1021_4 HRGMv2_1021_4_118 124961 126052 - 3.A.1.5.34
TC HRGMv2_1021_4 HRGMv2_1021_4_119 126055 126990 - 3.A.1.5.11
TC HRGMv2_1021_4 HRGMv2_1021_4_120 127005 128042 - 3.A.1.5.37
TC HRGMv2_1021_4 HRGMv2_1021_4_121 128199 129875 - 3.A.1.5.35
Gene ID: HRGMv2_1021_4_114
Type: CAZyme
Location: 117697 - 119904 (-)
Gene ID: HRGMv2_1021_4_115
Type: STP
Location: 120016 - 120762 (-)
Gene ID: HRGMv2_1021_4_116
Type: STP
Location: 120841 - 123186 (-)
Gene ID: HRGMv2_1021_4_117
Type: TC
Location: 123932 - 124960 (-)
Gene ID: HRGMv2_1021_4_118
Type: TC
Location: 124961 - 126052 (-)
Gene ID: HRGMv2_1021_4_119
Type: TC
Location: 126055 - 126990 (-)
Gene ID: HRGMv2_1021_4_120
Type: TC
Location: 127005 - 128042 (-)
Gene ID: HRGMv2_1021_4_121
Type: TC
Location: 128199 - 129875 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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