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Cluster: HRGMv2_1021_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1021_2 HRGMv2_1021_2_174 189238 191580 - 3.A.3.5.15
TC HRGMv2_1021_2 HRGMv2_1021_2_175 191987 194224 + 1.I.1.1.3
TC HRGMv2_1021_2 HRGMv2_1021_2_176 194672 195184 + 4.A.1.2.5
pfam HRGMv2_1021_2 HRGMv2_1021_2_177 195191 196057 + PRD | PRD | CAT_RBD
TC HRGMv2_1021_2 HRGMv2_1021_2_178 196157 197773 + 4.A.1.1.3
CAZyme HRGMv2_1021_2 HRGMv2_1021_2_179 197777 199159 + GH4
Gene ID: HRGMv2_1021_2_174
Type: TC
Location: 189238 - 191580 (-)
Gene ID: HRGMv2_1021_2_175
Type: TC
Location: 191987 - 194224 (+)
Gene ID: HRGMv2_1021_2_176
Type: TC
Location: 194672 - 195184 (+)
Gene ID: HRGMv2_1021_2_177
Type: pfam
Location: 195191 - 196057 (+)
Gene ID: HRGMv2_1021_2_178
Type: TC
Location: 196157 - 197773 (+)
Gene ID: HRGMv2_1021_2_179
Type: CAZyme
Location: 197777 - 199159 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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