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Cluster: HRGMv2_1021_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1021_8 HRGMv2_1021_8_23 25593 26762 - CE9
STP HRGMv2_1021_8 HRGMv2_1021_8_24 26881 28047 - SIS | SIS
TF HRGMv2_1021_8 HRGMv2_1021_8_25 28162 28893 - GntR
TC HRGMv2_1021_8 HRGMv2_1021_8_26 29078 30160 - 4.A.6.1.4
TC HRGMv2_1021_8 HRGMv2_1021_8_27 30150 30950 - 4.A.6.1.4
TC HRGMv2_1021_8 HRGMv2_1021_8_28 31041 31523 - 4.A.6.1.4
pfam HRGMv2_1021_8 HRGMv2_1021_8_29 31560 31841 - YajC
TC HRGMv2_1021_8 HRGMv2_1021_8_30 31841 32284 - 4.A.6.1.16
Gene ID: HRGMv2_1021_8_23
Type: CAZyme
Location: 25593 - 26762 (-)
Gene ID: HRGMv2_1021_8_24
Type: STP
Location: 26881 - 28047 (-)
Gene ID: HRGMv2_1021_8_25
Type: TF
Location: 28162 - 28893 (-)
Gene ID: HRGMv2_1021_8_26
Type: TC
Location: 29078 - 30160 (-)
Gene ID: HRGMv2_1021_8_27
Type: TC
Location: 30150 - 30950 (-)
Gene ID: HRGMv2_1021_8_28
Type: TC
Location: 31041 - 31523 (-)
Gene ID: HRGMv2_1021_8_29
Type: pfam
Location: 31560 - 31841 (-)
Gene ID: HRGMv2_1021_8_30
Type: TC
Location: 31841 - 32284 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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