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Cluster: HRGMv2_1021_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1021_8 HRGMv2_1021_8_2 1353 1691 - 4.A.3.1.2
TF HRGMv2_1021_8 HRGMv2_1021_8_3 1906 2910 - LacI
TC HRGMv2_1021_8 HRGMv2_1021_8_4 3267 5039 + 4.A.3.1.1
CAZyme HRGMv2_1021_8 HRGMv2_1021_8_5 5236 6675 + GH1
TF HRGMv2_1021_8 HRGMv2_1021_8_6 6942 7979 - LacI
CAZyme HRGMv2_1021_8 HRGMv2_1021_8_7 8321 9763 + GH1
TC HRGMv2_1021_8 HRGMv2_1021_8_8 9940 11700 + 4.A.3.1.1
TF HRGMv2_1021_8 HRGMv2_1021_8_9 12034 13044 - LacI
TC HRGMv2_1021_8 HRGMv2_1021_8_10 13320 15098 + 4.A.3.1.1
CAZyme HRGMv2_1021_8 HRGMv2_1021_8_11 15174 16595 + GH1
Gene ID: HRGMv2_1021_8_2
Type: TC
Location: 1353 - 1691 (-)
Gene ID: HRGMv2_1021_8_3
Type: TF
Location: 1906 - 2910 (-)
Gene ID: HRGMv2_1021_8_4
Type: TC
Location: 3267 - 5039 (+)
Gene ID: HRGMv2_1021_8_5
Type: CAZyme
Location: 5236 - 6675 (+)
Gene ID: HRGMv2_1021_8_6
Type: TF
Location: 6942 - 7979 (-)
Gene ID: HRGMv2_1021_8_7
Type: CAZyme
Location: 8321 - 9763 (+)
Gene ID: HRGMv2_1021_8_8
Type: TC
Location: 9940 - 11700 (+)
Gene ID: HRGMv2_1021_8_9
Type: TF
Location: 12034 - 13044 (-)
Gene ID: HRGMv2_1021_8_10
Type: TC
Location: 13320 - 15098 (+)
Gene ID: HRGMv2_1021_8_11
Type: CAZyme
Location: 15174 - 16595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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