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Cluster: HRGMv2_1021_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1021_4 HRGMv2_1021_4_133 141209 142093 - CE7
TC HRGMv2_1021_4 HRGMv2_1021_4_134 142267 143094 - 3.A.1.5.27
TC HRGMv2_1021_4 HRGMv2_1021_4_135 143095 145110 - 3.A.1.5.25
TC HRGMv2_1021_4 HRGMv2_1021_4_136 145114 146070 - 3.A.1.5.38
TC HRGMv2_1021_4 HRGMv2_1021_4_137 146228 147841 - 3.A.1.5.27
pfam HRGMv2_1021_4 HRGMv2_1021_4_138 148207 150147 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1021_4 HRGMv2_1021_4_139 150154 151836 - 2.A.66.4.4
Gene ID: HRGMv2_1021_4_133
Type: CAZyme
Location: 141209 - 142093 (-)
Gene ID: HRGMv2_1021_4_134
Type: TC
Location: 142267 - 143094 (-)
Gene ID: HRGMv2_1021_4_135
Type: TC
Location: 143095 - 145110 (-)
Gene ID: HRGMv2_1021_4_136
Type: TC
Location: 145114 - 146070 (-)
Gene ID: HRGMv2_1021_4_137
Type: TC
Location: 146228 - 147841 (-)
Gene ID: HRGMv2_1021_4_138
Type: pfam
Location: 148207 - 150147 (-)
Gene ID: HRGMv2_1021_4_139
Type: TC
Location: 150154 - 151836 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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