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Cluster: HRGMv2_1020_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1020_39 HRGMv2_1020_39_2 995 2806 - 3.D.1.5.1
STP HRGMv2_1020_39 HRGMv2_1020_39_3 2800 4632 - Pyr_redox_2
CAZyme HRGMv2_1020_39 HRGMv2_1020_39_4 5001 6383 - GH4
TC HRGMv2_1020_39 HRGMv2_1020_39_5 6387 8003 - 4.A.1.1.3
pfam HRGMv2_1020_39 HRGMv2_1020_39_6 8103 8756 - PRD | PRD
pfam HRGMv2_1020_39 HRGMv2_1020_39_7 8802 8969 - CAT_RBD
TC HRGMv2_1020_39 HRGMv2_1020_39_8 8976 9488 - 4.A.1.2.5
TC HRGMv2_1020_39 HRGMv2_1020_39_9 9965 12220 - 1.I.1.1.3
Gene ID: HRGMv2_1020_39_2
Type: TC
Location: 995 - 2806 (-)
Gene ID: HRGMv2_1020_39_3
Type: STP
Location: 2800 - 4632 (-)
Gene ID: HRGMv2_1020_39_4
Type: CAZyme
Location: 5001 - 6383 (-)
Gene ID: HRGMv2_1020_39_5
Type: TC
Location: 6387 - 8003 (-)
Gene ID: HRGMv2_1020_39_6
Type: pfam
Location: 8103 - 8756 (-)
Gene ID: HRGMv2_1020_39_7
Type: pfam
Location: 8802 - 8969 (-)
Gene ID: HRGMv2_1020_39_8
Type: TC
Location: 8976 - 9488 (-)
Gene ID: HRGMv2_1020_39_9
Type: TC
Location: 9965 - 12220 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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