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Cluster: HRGMv2_1019_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1019_15 HRGMv2_1019_15_8 7831 9336 + GH77
CAZyme HRGMv2_1019_15 HRGMv2_1019_15_9 9465 11732 + GT35
TC HRGMv2_1019_15 HRGMv2_1019_15_10 12110 13309 - 3.A.1.1.22
TC HRGMv2_1019_15 HRGMv2_1019_15_11 13378 14217 - 3.A.1.1.45
TC HRGMv2_1019_15 HRGMv2_1019_15_12 14217 15071 - 3.A.1.1.45
TC HRGMv2_1019_15 HRGMv2_1019_15_13 15159 16475 - 3.A.1.1.45
TF HRGMv2_1019_15 HRGMv2_1019_15_14 16782 17501 - GntR
TC HRGMv2_1019_15 HRGMv2_1019_15_15 17764 20181 + 4.A.1.1.8
Gene ID: HRGMv2_1019_15_8
Type: CAZyme
Location: 7831 - 9336 (+)
Gene ID: HRGMv2_1019_15_9
Type: CAZyme
Location: 9465 - 11732 (+)
Gene ID: HRGMv2_1019_15_10
Type: TC
Location: 12110 - 13309 (-)
Gene ID: HRGMv2_1019_15_11
Type: TC
Location: 13378 - 14217 (-)
Gene ID: HRGMv2_1019_15_12
Type: TC
Location: 14217 - 15071 (-)
Gene ID: HRGMv2_1019_15_13
Type: TC
Location: 15159 - 16475 (-)
Gene ID: HRGMv2_1019_15_14
Type: TF
Location: 16782 - 17501 (-)
Gene ID: HRGMv2_1019_15_15
Type: TC
Location: 17764 - 20181 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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