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Cluster: HRGMv2_1019_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1019_57 HRGMv2_1019_57_3 2098 3498 + GH1
TC HRGMv2_1019_57 HRGMv2_1019_57_4 3619 4962 + 4.A.3.2.9
TC HRGMv2_1019_57 HRGMv2_1019_57_5 5124 5426 + 4.A.3.2.9
TC HRGMv2_1019_57 HRGMv2_1019_57_6 5436 5768 + 4.A.3.2.3
STP HRGMv2_1019_57 HRGMv2_1019_57_7 6010 6963 + Glucokinase
pfam HRGMv2_1019_57 HRGMv2_1019_57_8 7129 8052 + DHH | DHHA2
TC HRGMv2_1019_57 HRGMv2_1019_57_9 8320 9678 + 2.A.33.1.1
Gene ID: HRGMv2_1019_57_3
Type: CAZyme
Location: 2098 - 3498 (+)
Gene ID: HRGMv2_1019_57_4
Type: TC
Location: 3619 - 4962 (+)
Gene ID: HRGMv2_1019_57_5
Type: TC
Location: 5124 - 5426 (+)
Gene ID: HRGMv2_1019_57_6
Type: TC
Location: 5436 - 5768 (+)
Gene ID: HRGMv2_1019_57_7
Type: STP
Location: 6010 - 6963 (+)
Gene ID: HRGMv2_1019_57_8
Type: pfam
Location: 7129 - 8052 (+)
Gene ID: HRGMv2_1019_57_9
Type: TC
Location: 8320 - 9678 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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