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Cluster: HRGMv2_1016_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1016_2 HRGMv2_1016_2_22 25392 26099 + 1.C.82.1.1
pfam HRGMv2_1016_2 HRGMv2_1016_2_23 26225 26935 - Metallophos | Metallophos_2
pfam HRGMv2_1016_2 HRGMv2_1016_2_24 26932 28848 - Bmp
TC HRGMv2_1016_2 HRGMv2_1016_2_25 28942 29709 - 1.A.23.4.2
TC HRGMv2_1016_2 HRGMv2_1016_2_26 30047 30841 - 3.A.1.34.1
TC HRGMv2_1016_2 HRGMv2_1016_2_27 30834 31757 - 3.A.1.34.1
TC HRGMv2_1016_2 HRGMv2_1016_2_28 31962 32942 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1016_2 HRGMv2_1016_2_29 33103 33888 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1016_2 HRGMv2_1016_2_30 34147 35550 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1016_2 HRGMv2_1016_2_31 35732 36295 - 4.A.1.2.6
peptidase HRGMv2_1016_2 HRGMv2_1016_2_32 36539 37441 + S09.UPW
TC HRGMv2_1016_2 HRGMv2_1016_2_33 37930 40290 + 9.A.8.1.6
TC HRGMv2_1016_2 HRGMv2_1016_2_34 40411 41607 + 2.A.1.2.18
CAZyme HRGMv2_1016_2 HRGMv2_1016_2_35 41761 43137 + GH13_20
Gene ID: HRGMv2_1016_2_22
Type: TC
Location: 25392 - 26099 (+)
Gene ID: HRGMv2_1016_2_23
Type: pfam
Location: 26225 - 26935 (-)
Gene ID: HRGMv2_1016_2_24
Type: pfam
Location: 26932 - 28848 (-)
Gene ID: HRGMv2_1016_2_25
Type: TC
Location: 28942 - 29709 (-)
Gene ID: HRGMv2_1016_2_26
Type: TC
Location: 30047 - 30841 (-)
Gene ID: HRGMv2_1016_2_27
Type: TC
Location: 30834 - 31757 (-)
Gene ID: HRGMv2_1016_2_28
Type: TC
Location: 31962 - 32942 (-)
Gene ID: HRGMv2_1016_2_29
Type:
Location: 33103 - 33888 (-)
Gene ID: HRGMv2_1016_2_30
Type: pfam
Location: 34147 - 35550 (-)
Gene ID: HRGMv2_1016_2_31
Type: TC
Location: 35732 - 36295 (-)
Gene ID: HRGMv2_1016_2_32
Type: peptidase
Location: 36539 - 37441 (+)
Gene ID: HRGMv2_1016_2_33
Type: TC
Location: 37930 - 40290 (+)
Gene ID: HRGMv2_1016_2_34
Type: TC
Location: 40411 - 41607 (+)
Gene ID: HRGMv2_1016_2_35
Type: CAZyme
Location: 41761 - 43137 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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