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Cluster: HRGMv2_1016_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1016_1 HRGMv2_1016_1_65 75090 75428 - 4.A.3.1.2
TF HRGMv2_1016_1 HRGMv2_1016_1_66 75643 76647 - LacI
TC HRGMv2_1016_1 HRGMv2_1016_1_67 77005 78780 + 4.A.3.1.1
CAZyme HRGMv2_1016_1 HRGMv2_1016_1_68 78847 80286 + GH1
TF HRGMv2_1016_1 HRGMv2_1016_1_69 80553 81563 - LacI
TC HRGMv2_1016_1 HRGMv2_1016_1_70 81841 83619 + 4.A.3.1.1
CAZyme HRGMv2_1016_1 HRGMv2_1016_1_71 83695 85116 + GH1
TF HRGMv2_1016_1 HRGMv2_1016_1_72 85622 86386 - HTH_DeoR
sulfatase HRGMv2_1016_1 HRGMv2_1016_1_73 86593 87645 + S1_4
TC HRGMv2_1016_1 HRGMv2_1016_1_74 87972 88454 - 4.A.6.1.3
Gene ID: HRGMv2_1016_1_65
Type: TC
Location: 75090 - 75428 (-)
Gene ID: HRGMv2_1016_1_66
Type: TF
Location: 75643 - 76647 (-)
Gene ID: HRGMv2_1016_1_67
Type: TC
Location: 77005 - 78780 (+)
Gene ID: HRGMv2_1016_1_68
Type: CAZyme
Location: 78847 - 80286 (+)
Gene ID: HRGMv2_1016_1_69
Type: TF
Location: 80553 - 81563 (-)
Gene ID: HRGMv2_1016_1_70
Type: TC
Location: 81841 - 83619 (+)
Gene ID: HRGMv2_1016_1_71
Type: CAZyme
Location: 83695 - 85116 (+)
Gene ID: HRGMv2_1016_1_72
Type: TF
Location: 85622 - 86386 (-)
Gene ID: HRGMv2_1016_1_73
Type: sulfatase
Location: 86593 - 87645 (+)
Gene ID: HRGMv2_1016_1_74
Type: TC
Location: 87972 - 88454 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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