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Cluster: HRGMv2_1016_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1016_29 HRGMv2_1016_29_8 10903 11952 - GT2
CAZyme HRGMv2_1016_29 HRGMv2_1016_29_9 11981 12835 - GT8
CAZyme HRGMv2_1016_29 HRGMv2_1016_29_10 12837 13634 - GT32
pfam HRGMv2_1016_29 HRGMv2_1016_29_11 13664 14758 - EpsG
CAZyme HRGMv2_1016_29 HRGMv2_1016_29_12 14811 15956 - GT4
CAZyme HRGMv2_1016_29 HRGMv2_1016_29_13 16029 17048 - GT2
CAZyme HRGMv2_1016_29 HRGMv2_1016_29_14 17041 17850 - GT2
TC HRGMv2_1016_29 HRGMv2_1016_29_15 17937 18740 - 9.B.18.1.2
Gene ID: HRGMv2_1016_29_8
Type: CAZyme
Location: 10903 - 11952 (-)
Gene ID: HRGMv2_1016_29_9
Type: CAZyme
Location: 11981 - 12835 (-)
Gene ID: HRGMv2_1016_29_10
Type: CAZyme
Location: 12837 - 13634 (-)
Gene ID: HRGMv2_1016_29_11
Type: pfam
Location: 13664 - 14758 (-)
Gene ID: HRGMv2_1016_29_12
Type: CAZyme
Location: 14811 - 15956 (-)
Gene ID: HRGMv2_1016_29_13
Type: CAZyme
Location: 16029 - 17048 (-)
Gene ID: HRGMv2_1016_29_14
Type: CAZyme
Location: 17041 - 17850 (-)
Gene ID: HRGMv2_1016_29_15
Type: TC
Location: 17937 - 18740 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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