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Cluster: HRGMv2_1016_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1016_17 HRGMv2_1016_17_10 13621 15303 + 2.A.66.4.4
pfam HRGMv2_1016_17 HRGMv2_1016_17_11 15310 17250 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1016_17 HRGMv2_1016_17_12 17615 19228 + 3.A.1.5.27
TC HRGMv2_1016_17 HRGMv2_1016_17_13 19386 20342 + 3.A.1.5.38
TC HRGMv2_1016_17 HRGMv2_1016_17_14 20346 22361 + 3.A.1.5.25
TC HRGMv2_1016_17 HRGMv2_1016_17_15 22362 23189 + 3.A.1.5.27
CAZyme HRGMv2_1016_17 HRGMv2_1016_17_16 23321 24247 + CE7
Gene ID: HRGMv2_1016_17_10
Type: TC
Location: 13621 - 15303 (+)
Gene ID: HRGMv2_1016_17_11
Type: pfam
Location: 15310 - 17250 (+)
Gene ID: HRGMv2_1016_17_12
Type: TC
Location: 17615 - 19228 (+)
Gene ID: HRGMv2_1016_17_13
Type: TC
Location: 19386 - 20342 (+)
Gene ID: HRGMv2_1016_17_14
Type: TC
Location: 20346 - 22361 (+)
Gene ID: HRGMv2_1016_17_15
Type: TC
Location: 22362 - 23189 (+)
Gene ID: HRGMv2_1016_17_16
Type: CAZyme
Location: 23321 - 24247 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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