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Cluster: HRGMv2_1015_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1015_6 HRGMv2_1015_6_54 61629 62423 - 3.A.1.34.1
TC HRGMv2_1015_6 HRGMv2_1015_6_55 62416 63339 - 3.A.1.34.1
TC HRGMv2_1015_6 HRGMv2_1015_6_56 63543 64523 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1015_6 HRGMv2_1015_6_57 64684 65469 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1015_6 HRGMv2_1015_6_58 65729 67132 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1015_6 HRGMv2_1015_6_59 67314 67877 - 4.A.1.2.6
peptidase HRGMv2_1015_6 HRGMv2_1015_6_60 68121 69020 + S09.UPW
TC HRGMv2_1015_6 HRGMv2_1015_6_61 69494 71854 + 9.A.8.1.6
TC HRGMv2_1015_6 HRGMv2_1015_6_62 71975 73171 + 2.A.1.2.18
CAZyme HRGMv2_1015_6 HRGMv2_1015_6_63 73327 74703 + GH13_20
Gene ID: HRGMv2_1015_6_54
Type: TC
Location: 61629 - 62423 (-)
Gene ID: HRGMv2_1015_6_55
Type: TC
Location: 62416 - 63339 (-)
Gene ID: HRGMv2_1015_6_56
Type: TC
Location: 63543 - 64523 (-)
Gene ID: HRGMv2_1015_6_57
Type:
Location: 64684 - 65469 (-)
Gene ID: HRGMv2_1015_6_58
Type: pfam
Location: 65729 - 67132 (-)
Gene ID: HRGMv2_1015_6_59
Type: TC
Location: 67314 - 67877 (-)
Gene ID: HRGMv2_1015_6_60
Type: peptidase
Location: 68121 - 69020 (+)
Gene ID: HRGMv2_1015_6_61
Type: TC
Location: 69494 - 71854 (+)
Gene ID: HRGMv2_1015_6_62
Type: TC
Location: 71975 - 73171 (+)
Gene ID: HRGMv2_1015_6_63
Type: CAZyme
Location: 73327 - 74703 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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