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Cluster: HRGMv2_1015_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1015_3 HRGMv2_1015_3_127 137881 138807 - CE7
TC HRGMv2_1015_3 HRGMv2_1015_3_128 138939 139766 - 3.A.1.5.27
TC HRGMv2_1015_3 HRGMv2_1015_3_129 139767 141782 - 3.A.1.5.25
TC HRGMv2_1015_3 HRGMv2_1015_3_130 141786 142742 - 3.A.1.5.38
TC HRGMv2_1015_3 HRGMv2_1015_3_131 142898 144511 - 3.A.1.5.27
pfam HRGMv2_1015_3 HRGMv2_1015_3_132 144877 146817 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1015_3 HRGMv2_1015_3_133 146824 148506 - 2.A.66.4.4
Gene ID: HRGMv2_1015_3_127
Type: CAZyme
Location: 137881 - 138807 (-)
Gene ID: HRGMv2_1015_3_128
Type: TC
Location: 138939 - 139766 (-)
Gene ID: HRGMv2_1015_3_129
Type: TC
Location: 139767 - 141782 (-)
Gene ID: HRGMv2_1015_3_130
Type: TC
Location: 141786 - 142742 (-)
Gene ID: HRGMv2_1015_3_131
Type: TC
Location: 142898 - 144511 (-)
Gene ID: HRGMv2_1015_3_132
Type: pfam
Location: 144877 - 146817 (-)
Gene ID: HRGMv2_1015_3_133
Type: TC
Location: 146824 - 148506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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