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Cluster: HRGMv2_1015_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1015_3 HRGMv2_1015_3_108 114436 116169 - GH13_30
STP HRGMv2_1015_3 HRGMv2_1015_3_109 116755 117501 - STAS
STP HRGMv2_1015_3 HRGMv2_1015_3_110 117580 119925 - GAF | SpoIIE
TC HRGMv2_1015_3 HRGMv2_1015_3_111 120672 121700 - 3.A.1.5.36
TC HRGMv2_1015_3 HRGMv2_1015_3_112 121700 122791 - 3.A.1.5.37
TC HRGMv2_1015_3 HRGMv2_1015_3_113 122794 123729 - 3.A.1.5.11
TC HRGMv2_1015_3 HRGMv2_1015_3_114 123744 124781 - 3.A.1.5.37
TC HRGMv2_1015_3 HRGMv2_1015_3_115 124938 126614 - 3.A.1.5.35
Gene ID: HRGMv2_1015_3_108
Type: CAZyme
Location: 114436 - 116169 (-)
Gene ID: HRGMv2_1015_3_109
Type: STP
Location: 116755 - 117501 (-)
Gene ID: HRGMv2_1015_3_110
Type: STP
Location: 117580 - 119925 (-)
Gene ID: HRGMv2_1015_3_111
Type: TC
Location: 120672 - 121700 (-)
Gene ID: HRGMv2_1015_3_112
Type: TC
Location: 121700 - 122791 (-)
Gene ID: HRGMv2_1015_3_113
Type: TC
Location: 122794 - 123729 (-)
Gene ID: HRGMv2_1015_3_114
Type: TC
Location: 123744 - 124781 (-)
Gene ID: HRGMv2_1015_3_115
Type: TC
Location: 124938 - 126614 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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