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Cluster: HRGMv2_1015_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1015_24 HRGMv2_1015_24_5 5315 6820 + GH77
CAZyme HRGMv2_1015_24 HRGMv2_1015_24_6 6949 9216 + GT35
TC HRGMv2_1015_24 HRGMv2_1015_24_7 9673 10872 - 3.A.1.1.22
TC HRGMv2_1015_24 HRGMv2_1015_24_8 10941 11780 - 3.A.1.1.45
TC HRGMv2_1015_24 HRGMv2_1015_24_9 11780 12634 - 3.A.1.1.45
TC HRGMv2_1015_24 HRGMv2_1015_24_10 12722 14038 - 3.A.1.1.45
TF HRGMv2_1015_24 HRGMv2_1015_24_11 14345 15064 - GntR
TC HRGMv2_1015_24 HRGMv2_1015_24_12 15327 17744 + 4.A.1.1.8
Gene ID: HRGMv2_1015_24_5
Type: CAZyme
Location: 5315 - 6820 (+)
Gene ID: HRGMv2_1015_24_6
Type: CAZyme
Location: 6949 - 9216 (+)
Gene ID: HRGMv2_1015_24_7
Type: TC
Location: 9673 - 10872 (-)
Gene ID: HRGMv2_1015_24_8
Type: TC
Location: 10941 - 11780 (-)
Gene ID: HRGMv2_1015_24_9
Type: TC
Location: 11780 - 12634 (-)
Gene ID: HRGMv2_1015_24_10
Type: TC
Location: 12722 - 14038 (-)
Gene ID: HRGMv2_1015_24_11
Type: TF
Location: 14345 - 15064 (-)
Gene ID: HRGMv2_1015_24_12
Type: TC
Location: 15327 - 17744 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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