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Cluster: HRGMv2_1015_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1015_11 HRGMv2_1015_11_30 27382 27864 + 4.A.6.1.5
sulfatase HRGMv2_1015_11 HRGMv2_1015_11_31 28190 29242 - S1_4
TF HRGMv2_1015_11 HRGMv2_1015_11_32 29448 30212 + HTH_DeoR
CAZyme HRGMv2_1015_11 HRGMv2_1015_11_33 30786 32207 - GH1
TC HRGMv2_1015_11 HRGMv2_1015_11_34 32283 34067 - 4.A.3.1.1
TF HRGMv2_1015_11 HRGMv2_1015_11_35 34343 35353 + LacI
TC HRGMv2_1015_11 HRGMv2_1015_11_36 35687 37447 - 4.A.3.1.1
CAZyme HRGMv2_1015_11 HRGMv2_1015_11_37 37624 39066 - GH1
TF HRGMv2_1015_11 HRGMv2_1015_11_38 39408 40445 + LacI
CAZyme HRGMv2_1015_11 HRGMv2_1015_11_39 40708 42147 - GH1
TC HRGMv2_1015_11 HRGMv2_1015_11_40 42214 43989 - 4.A.3.1.1
TF HRGMv2_1015_11 HRGMv2_1015_11_41 44347 45351 + LacI
TC HRGMv2_1015_11 HRGMv2_1015_11_42 45566 45904 + 4.A.3.1.2
Gene ID: HRGMv2_1015_11_30
Type: TC
Location: 27382 - 27864 (+)
Gene ID: HRGMv2_1015_11_31
Type: sulfatase
Location: 28190 - 29242 (-)
Gene ID: HRGMv2_1015_11_32
Type: TF
Location: 29448 - 30212 (+)
Gene ID: HRGMv2_1015_11_33
Type: CAZyme
Location: 30786 - 32207 (-)
Gene ID: HRGMv2_1015_11_34
Type: TC
Location: 32283 - 34067 (-)
Gene ID: HRGMv2_1015_11_35
Type: TF
Location: 34343 - 35353 (+)
Gene ID: HRGMv2_1015_11_36
Type: TC
Location: 35687 - 37447 (-)
Gene ID: HRGMv2_1015_11_37
Type: CAZyme
Location: 37624 - 39066 (-)
Gene ID: HRGMv2_1015_11_38
Type: TF
Location: 39408 - 40445 (+)
Gene ID: HRGMv2_1015_11_39
Type: CAZyme
Location: 40708 - 42147 (-)
Gene ID: HRGMv2_1015_11_40
Type: TC
Location: 42214 - 43989 (-)
Gene ID: HRGMv2_1015_11_41
Type: TF
Location: 44347 - 45351 (+)
Gene ID: HRGMv2_1015_11_42
Type: TC
Location: 45566 - 45904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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