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Cluster: HRGMv2_1015_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1015_11 HRGMv2_1015_11_17 16873 17316 + 4.A.6.1.16
pfam HRGMv2_1015_11 HRGMv2_1015_11_18 17316 17597 + YajC
TC HRGMv2_1015_11 HRGMv2_1015_11_19 17634 18116 + 4.A.6.1.4
TC HRGMv2_1015_11 HRGMv2_1015_11_20 18207 19007 + 4.A.6.1.4
TC HRGMv2_1015_11 HRGMv2_1015_11_21 18997 20079 + 4.A.6.1.4
TF HRGMv2_1015_11 HRGMv2_1015_11_22 20265 20996 + GntR
STP HRGMv2_1015_11 HRGMv2_1015_11_23 21111 22277 + SIS | SIS
CAZyme HRGMv2_1015_11 HRGMv2_1015_11_24 22397 23566 + CE9
Gene ID: HRGMv2_1015_11_17
Type: TC
Location: 16873 - 17316 (+)
Gene ID: HRGMv2_1015_11_18
Type: pfam
Location: 17316 - 17597 (+)
Gene ID: HRGMv2_1015_11_19
Type: TC
Location: 17634 - 18116 (+)
Gene ID: HRGMv2_1015_11_20
Type: TC
Location: 18207 - 19007 (+)
Gene ID: HRGMv2_1015_11_21
Type: TC
Location: 18997 - 20079 (+)
Gene ID: HRGMv2_1015_11_22
Type: TF
Location: 20265 - 20996 (+)
Gene ID: HRGMv2_1015_11_23
Type: STP
Location: 21111 - 22277 (+)
Gene ID: HRGMv2_1015_11_24
Type: CAZyme
Location: 22397 - 23566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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