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Cluster: HRGMv2_1015_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1015_1 HRGMv2_1015_1_38 49255 50814 + 2.A.2.5.1
CAZyme HRGMv2_1015_1 HRGMv2_1015_1_39 50930 52525 + GH28
peptidase HRGMv2_1015_1 HRGMv2_1015_1_40 52630 53439 + S09.UPW
CAZyme HRGMv2_1015_1 HRGMv2_1015_1_41 53436 55601 + CE19 | CE8
pfam HRGMv2_1015_1 HRGMv2_1015_1_42 55671 56339 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_1015_1 HRGMv2_1015_1_43 56447 57685 + GH105
Gene ID: HRGMv2_1015_1_38
Type: TC
Location: 49255 - 50814 (+)
Gene ID: HRGMv2_1015_1_39
Type: CAZyme
Location: 50930 - 52525 (+)
Gene ID: HRGMv2_1015_1_40
Type: peptidase
Location: 52630 - 53439 (+)
Gene ID: HRGMv2_1015_1_41
Type: CAZyme
Location: 53436 - 55601 (+)
Gene ID: HRGMv2_1015_1_42
Type: pfam
Location: 55671 - 56339 (+)
Gene ID: HRGMv2_1015_1_43
Type: CAZyme
Location: 56447 - 57685 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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