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Cluster: HRGMv2_1014_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1014_3 HRGMv2_1014_3_100 111940 112734 - 3.A.1.34.1
TC HRGMv2_1014_3 HRGMv2_1014_3_101 112727 113650 - 3.A.1.34.1
TC HRGMv2_1014_3 HRGMv2_1014_3_102 113855 114835 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1014_3 HRGMv2_1014_3_103 114996 115781 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1014_3 HRGMv2_1014_3_104 116040 117443 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1014_3 HRGMv2_1014_3_105 117625 118266 - 4.A.1.2.6
peptidase HRGMv2_1014_3 HRGMv2_1014_3_106 118435 119334 + S09.UPW
NULL(UNKNOWN) HRGMv2_1014_3 HRGMv2_1014_3_107 119384 119704 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1014_3 HRGMv2_1014_3_108 119826 122186 + 9.A.8.1.6
TC HRGMv2_1014_3 HRGMv2_1014_3_109 122310 123506 + 2.A.1.2.18
CAZyme HRGMv2_1014_3 HRGMv2_1014_3_110 123660 125036 + GH13_20
Gene ID: HRGMv2_1014_3_100
Type: TC
Location: 111940 - 112734 (-)
Gene ID: HRGMv2_1014_3_101
Type: TC
Location: 112727 - 113650 (-)
Gene ID: HRGMv2_1014_3_102
Type: TC
Location: 113855 - 114835 (-)
Gene ID: HRGMv2_1014_3_103
Type:
Location: 114996 - 115781 (-)
Gene ID: HRGMv2_1014_3_104
Type: pfam
Location: 116040 - 117443 (-)
Gene ID: HRGMv2_1014_3_105
Type: TC
Location: 117625 - 118266 (-)
Gene ID: HRGMv2_1014_3_106
Type: peptidase
Location: 118435 - 119334 (+)
Gene ID: HRGMv2_1014_3_107
Type:
Location: 119384 - 119704 (+)
Gene ID: HRGMv2_1014_3_108
Type: TC
Location: 119826 - 122186 (+)
Gene ID: HRGMv2_1014_3_109
Type: TC
Location: 122310 - 123506 (+)
Gene ID: HRGMv2_1014_3_110
Type: CAZyme
Location: 123660 - 125036 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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