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Cluster: HRGMv2_1014_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1014_31 HRGMv2_1014_31_7 7301 8470 - CE9
STP HRGMv2_1014_31 HRGMv2_1014_31_8 8589 9755 - SIS | SIS
TF HRGMv2_1014_31 HRGMv2_1014_31_9 9870 10601 - GntR
TC HRGMv2_1014_31 HRGMv2_1014_31_10 10787 11869 - 4.A.6.1.4
TC HRGMv2_1014_31 HRGMv2_1014_31_11 11859 12659 - 4.A.6.1.4
TC HRGMv2_1014_31 HRGMv2_1014_31_12 12750 13232 - 4.A.6.1.4
pfam HRGMv2_1014_31 HRGMv2_1014_31_13 13269 13550 - YajC
TC HRGMv2_1014_31 HRGMv2_1014_31_14 13550 13993 - 4.A.6.1.16
Gene ID: HRGMv2_1014_31_7
Type: CAZyme
Location: 7301 - 8470 (-)
Gene ID: HRGMv2_1014_31_8
Type: STP
Location: 8589 - 9755 (-)
Gene ID: HRGMv2_1014_31_9
Type: TF
Location: 9870 - 10601 (-)
Gene ID: HRGMv2_1014_31_10
Type: TC
Location: 10787 - 11869 (-)
Gene ID: HRGMv2_1014_31_11
Type: TC
Location: 11859 - 12659 (-)
Gene ID: HRGMv2_1014_31_12
Type: TC
Location: 12750 - 13232 (-)
Gene ID: HRGMv2_1014_31_13
Type: pfam
Location: 13269 - 13550 (-)
Gene ID: HRGMv2_1014_31_14
Type: TC
Location: 13550 - 13993 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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