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Cluster: HRGMv2_1014_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1014_25 HRGMv2_1014_25_6 7962 9467 + GH77
CAZyme HRGMv2_1014_25 HRGMv2_1014_25_7 9596 11863 + GT35
TC HRGMv2_1014_25 HRGMv2_1014_25_8 12320 13519 - 3.A.1.1.22
TC HRGMv2_1014_25 HRGMv2_1014_25_9 13588 14427 - 3.A.1.1.45
TC HRGMv2_1014_25 HRGMv2_1014_25_10 14427 15281 - 3.A.1.1.45
TC HRGMv2_1014_25 HRGMv2_1014_25_11 15369 16685 - 3.A.1.1.45
TF HRGMv2_1014_25 HRGMv2_1014_25_12 16992 17711 - GntR
NULL(UNKNOWN) HRGMv2_1014_25 HRGMv2_1014_25_13 17795 17914 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1014_25 HRGMv2_1014_25_14 17936 20386 + 4.A.1.1.8
Gene ID: HRGMv2_1014_25_6
Type: CAZyme
Location: 7962 - 9467 (+)
Gene ID: HRGMv2_1014_25_7
Type: CAZyme
Location: 9596 - 11863 (+)
Gene ID: HRGMv2_1014_25_8
Type: TC
Location: 12320 - 13519 (-)
Gene ID: HRGMv2_1014_25_9
Type: TC
Location: 13588 - 14427 (-)
Gene ID: HRGMv2_1014_25_10
Type: TC
Location: 14427 - 15281 (-)
Gene ID: HRGMv2_1014_25_11
Type: TC
Location: 15369 - 16685 (-)
Gene ID: HRGMv2_1014_25_12
Type: TF
Location: 16992 - 17711 (-)
Gene ID: HRGMv2_1014_25_13
Type:
Location: 17795 - 17914 (-)
Gene ID: HRGMv2_1014_25_14
Type: TC
Location: 17936 - 20386 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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