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Cluster: HRGMv2_1014_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1014_13 HRGMv2_1014_13_29 35545 37221 + 3.A.1.5.35
TC HRGMv2_1014_13 HRGMv2_1014_13_30 37378 38415 + 3.A.1.5.37
TC HRGMv2_1014_13 HRGMv2_1014_13_31 38430 39365 + 3.A.1.5.11
TC HRGMv2_1014_13 HRGMv2_1014_13_32 39368 40459 + 3.A.1.5.34
TC HRGMv2_1014_13 HRGMv2_1014_13_33 40460 41488 + 3.A.1.5.36
STP HRGMv2_1014_13 HRGMv2_1014_13_34 42227 44572 + GAF | SpoIIE
STP HRGMv2_1014_13 HRGMv2_1014_13_35 44651 45397 + STAS
CAZyme HRGMv2_1014_13 HRGMv2_1014_13_36 46325 48058 + GH13_30
Gene ID: HRGMv2_1014_13_29
Type: TC
Location: 35545 - 37221 (+)
Gene ID: HRGMv2_1014_13_30
Type: TC
Location: 37378 - 38415 (+)
Gene ID: HRGMv2_1014_13_31
Type: TC
Location: 38430 - 39365 (+)
Gene ID: HRGMv2_1014_13_32
Type: TC
Location: 39368 - 40459 (+)
Gene ID: HRGMv2_1014_13_33
Type: TC
Location: 40460 - 41488 (+)
Gene ID: HRGMv2_1014_13_34
Type: STP
Location: 42227 - 44572 (+)
Gene ID: HRGMv2_1014_13_35
Type: STP
Location: 44651 - 45397 (+)
Gene ID: HRGMv2_1014_13_36
Type: CAZyme
Location: 46325 - 48058 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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