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Cluster: HRGMv2_1013_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1013_24 HRGMv2_1013_24_5 7246 9699 - 4.A.1.1.8
TF HRGMv2_1013_24 HRGMv2_1013_24_6 9927 10646 + GntR
TC HRGMv2_1013_24 HRGMv2_1013_24_7 10953 12269 + 3.A.1.1.45
TC HRGMv2_1013_24 HRGMv2_1013_24_8 12359 13213 + 3.A.1.1.45
TC HRGMv2_1013_24 HRGMv2_1013_24_9 13213 14052 + 3.A.1.1.45
TC HRGMv2_1013_24 HRGMv2_1013_24_10 14121 15320 + 3.A.1.1.22
CAZyme HRGMv2_1013_24 HRGMv2_1013_24_11 15777 18044 - GT35
CAZyme HRGMv2_1013_24 HRGMv2_1013_24_12 18172 19275 - GH77
Gene ID: HRGMv2_1013_24_5
Type: TC
Location: 7246 - 9699 (-)
Gene ID: HRGMv2_1013_24_6
Type: TF
Location: 9927 - 10646 (+)
Gene ID: HRGMv2_1013_24_7
Type: TC
Location: 10953 - 12269 (+)
Gene ID: HRGMv2_1013_24_8
Type: TC
Location: 12359 - 13213 (+)
Gene ID: HRGMv2_1013_24_9
Type: TC
Location: 13213 - 14052 (+)
Gene ID: HRGMv2_1013_24_10
Type: TC
Location: 14121 - 15320 (+)
Gene ID: HRGMv2_1013_24_11
Type: CAZyme
Location: 15777 - 18044 (-)
Gene ID: HRGMv2_1013_24_12
Type: CAZyme
Location: 18172 - 19275 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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