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Cluster: HRGMv2_1013_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1013_5 HRGMv2_1013_5_4 4361 6664 + 2.A.66.4.4
pfam HRGMv2_1013_5 HRGMv2_1013_5_5 6671 8611 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1013_5 HRGMv2_1013_5_6 8977 10590 + 3.A.1.5.27
TC HRGMv2_1013_5 HRGMv2_1013_5_7 10748 11704 + 3.A.1.5.38
TC HRGMv2_1013_5 HRGMv2_1013_5_8 11708 13723 + 3.A.1.5.25
TC HRGMv2_1013_5 HRGMv2_1013_5_9 13724 14551 + 3.A.1.5.27
CAZyme HRGMv2_1013_5 HRGMv2_1013_5_10 14683 15609 + CE7
Gene ID: HRGMv2_1013_5_4
Type: TC
Location: 4361 - 6664 (+)
Gene ID: HRGMv2_1013_5_5
Type: pfam
Location: 6671 - 8611 (+)
Gene ID: HRGMv2_1013_5_6
Type: TC
Location: 8977 - 10590 (+)
Gene ID: HRGMv2_1013_5_7
Type: TC
Location: 10748 - 11704 (+)
Gene ID: HRGMv2_1013_5_8
Type: TC
Location: 11708 - 13723 (+)
Gene ID: HRGMv2_1013_5_9
Type: TC
Location: 13724 - 14551 (+)
Gene ID: HRGMv2_1013_5_10
Type: CAZyme
Location: 14683 - 15609 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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