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Cluster: HRGMv2_1012_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1012_22 HRGMv2_1012_22_10 13685 15367 + 2.A.66.4.4
pfam HRGMv2_1012_22 HRGMv2_1012_22_11 15374 17314 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1012_22 HRGMv2_1012_22_12 17680 19293 + 3.A.1.5.27
TC HRGMv2_1012_22 HRGMv2_1012_22_13 19451 20407 + 3.A.1.5.38
TC HRGMv2_1012_22 HRGMv2_1012_22_14 20411 22426 + 3.A.1.5.25
TC HRGMv2_1012_22 HRGMv2_1012_22_15 22427 23254 + 3.A.1.5.27
CAZyme HRGMv2_1012_22 HRGMv2_1012_22_16 23386 24312 + CE7
Gene ID: HRGMv2_1012_22_10
Type: TC
Location: 13685 - 15367 (+)
Gene ID: HRGMv2_1012_22_11
Type: pfam
Location: 15374 - 17314 (+)
Gene ID: HRGMv2_1012_22_12
Type: TC
Location: 17680 - 19293 (+)
Gene ID: HRGMv2_1012_22_13
Type: TC
Location: 19451 - 20407 (+)
Gene ID: HRGMv2_1012_22_14
Type: TC
Location: 20411 - 22426 (+)
Gene ID: HRGMv2_1012_22_15
Type: TC
Location: 22427 - 23254 (+)
Gene ID: HRGMv2_1012_22_16
Type: CAZyme
Location: 23386 - 24312 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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