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Cluster: HRGMv2_1010_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1010_17 HRGMv2_1010_17_17 16601 17527 - CE7
TC HRGMv2_1010_17 HRGMv2_1010_17_18 17659 18486 - 3.A.1.5.27
TC HRGMv2_1010_17 HRGMv2_1010_17_19 18487 20502 - 3.A.1.5.25
TC HRGMv2_1010_17 HRGMv2_1010_17_20 20506 21462 - 3.A.1.5.38
TC HRGMv2_1010_17 HRGMv2_1010_17_21 21620 23233 - 3.A.1.5.27
pfam HRGMv2_1010_17 HRGMv2_1010_17_22 23598 25538 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1010_17 HRGMv2_1010_17_23 25545 27848 - 2.A.66.4.4
Gene ID: HRGMv2_1010_17_17
Type: CAZyme
Location: 16601 - 17527 (-)
Gene ID: HRGMv2_1010_17_18
Type: TC
Location: 17659 - 18486 (-)
Gene ID: HRGMv2_1010_17_19
Type: TC
Location: 18487 - 20502 (-)
Gene ID: HRGMv2_1010_17_20
Type: TC
Location: 20506 - 21462 (-)
Gene ID: HRGMv2_1010_17_21
Type: TC
Location: 21620 - 23233 (-)
Gene ID: HRGMv2_1010_17_22
Type: pfam
Location: 23598 - 25538 (-)
Gene ID: HRGMv2_1010_17_23
Type: TC
Location: 25545 - 27848 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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