dbCAN Logo

Cluster: HRGMv2_1009_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1009_9 HRGMv2_1009_9_4 5295 6854 + 2.A.2.5.1
CAZyme HRGMv2_1009_9 HRGMv2_1009_9_5 6970 8565 + GH28
peptidase HRGMv2_1009_9 HRGMv2_1009_9_6 8670 9479 + S09.UPW
CAZyme HRGMv2_1009_9 HRGMv2_1009_9_7 9476 11641 + CE19 | CE8
pfam HRGMv2_1009_9 HRGMv2_1009_9_8 11711 12379 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_1009_9 HRGMv2_1009_9_9 12487 13725 + GH105
Gene ID: HRGMv2_1009_9_4
Type: TC
Location: 5295 - 6854 (+)
Gene ID: HRGMv2_1009_9_5
Type: CAZyme
Location: 6970 - 8565 (+)
Gene ID: HRGMv2_1009_9_6
Type: peptidase
Location: 8670 - 9479 (+)
Gene ID: HRGMv2_1009_9_7
Type: CAZyme
Location: 9476 - 11641 (+)
Gene ID: HRGMv2_1009_9_8
Type: pfam
Location: 11711 - 12379 (+)
Gene ID: HRGMv2_1009_9_9
Type: CAZyme
Location: 12487 - 13725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List