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Cluster: HRGMv2_1009_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1009_1 HRGMv2_1009_1_51 51167 52525 - 2.A.33.1.1
pfam HRGMv2_1009_1 HRGMv2_1009_1_52 52792 53715 - DHH | DHHA2
STP HRGMv2_1009_1 HRGMv2_1009_1_53 53882 54835 - Glucokinase
TC HRGMv2_1009_1 HRGMv2_1009_1_54 55077 55409 - 4.A.3.2.3
TC HRGMv2_1009_1 HRGMv2_1009_1_55 55419 55721 - 4.A.3.2.9
TC HRGMv2_1009_1 HRGMv2_1009_1_56 55883 57226 - 4.A.3.2.2
CAZyme HRGMv2_1009_1 HRGMv2_1009_1_57 57346 58746 - GH1
Gene ID: HRGMv2_1009_1_51
Type: TC
Location: 51167 - 52525 (-)
Gene ID: HRGMv2_1009_1_52
Type: pfam
Location: 52792 - 53715 (-)
Gene ID: HRGMv2_1009_1_53
Type: STP
Location: 53882 - 54835 (-)
Gene ID: HRGMv2_1009_1_54
Type: TC
Location: 55077 - 55409 (-)
Gene ID: HRGMv2_1009_1_55
Type: TC
Location: 55419 - 55721 (-)
Gene ID: HRGMv2_1009_1_56
Type: TC
Location: 55883 - 57226 (-)
Gene ID: HRGMv2_1009_1_57
Type: CAZyme
Location: 57346 - 58746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1009_1_55 vegan > omnivore 1.01807 0.01057

🧭 Explore Read Mapping of CGC

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