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Cluster: HRGMv2_1009_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1009_1 HRGMv2_1009_1_1 81 1841 + 4.A.3.1.1
TF HRGMv2_1009_1 HRGMv2_1009_1_2 2179 3189 - LacI
TC HRGMv2_1009_1 HRGMv2_1009_1_3 3465 5243 + 4.A.3.1.1
CAZyme HRGMv2_1009_1 HRGMv2_1009_1_4 5319 6740 + GH1
pfam HRGMv2_1009_1 HRGMv2_1009_1_5 7109 8341 + Fic
STP HRGMv2_1009_1 HRGMv2_1009_1_6 8379 8720 - DeoRC
TC HRGMv2_1009_1 HRGMv2_1009_1_7 8881 10575 - 4.A.3.1.1
Gene ID: HRGMv2_1009_1_1
Type: TC
Location: 81 - 1841 (+)
Gene ID: HRGMv2_1009_1_2
Type: TF
Location: 2179 - 3189 (-)
Gene ID: HRGMv2_1009_1_3
Type: TC
Location: 3465 - 5243 (+)
Gene ID: HRGMv2_1009_1_4
Type: CAZyme
Location: 5319 - 6740 (+)
Gene ID: HRGMv2_1009_1_5
Type: pfam
Location: 7109 - 8341 (+)
Gene ID: HRGMv2_1009_1_6
Type: STP
Location: 8379 - 8720 (-)
Gene ID: HRGMv2_1009_1_7
Type: TC
Location: 8881 - 10575 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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