dbCAN Logo

Cluster: HRGMv2_1008_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1008_8 HRGMv2_1008_8_31 27454 28875 - GH1
TC HRGMv2_1008_8 HRGMv2_1008_8_32 28952 30730 - 4.A.3.1.1
TF HRGMv2_1008_8 HRGMv2_1008_8_33 31006 32016 + LacI
TC HRGMv2_1008_8 HRGMv2_1008_8_34 32274 34034 - 4.A.3.1.1
CAZyme HRGMv2_1008_8 HRGMv2_1008_8_35 34211 35653 - GH1
TF HRGMv2_1008_8 HRGMv2_1008_8_36 35995 37032 + LacI
CAZyme HRGMv2_1008_8 HRGMv2_1008_8_37 37300 38739 - GH1
TC HRGMv2_1008_8 HRGMv2_1008_8_38 38806 40581 - 4.A.3.1.1
TF HRGMv2_1008_8 HRGMv2_1008_8_39 40939 41943 + LacI
TC HRGMv2_1008_8 HRGMv2_1008_8_40 42158 42496 + 4.A.3.1.2
Gene ID: HRGMv2_1008_8_31
Type: CAZyme
Location: 27454 - 28875 (-)
Gene ID: HRGMv2_1008_8_32
Type: TC
Location: 28952 - 30730 (-)
Gene ID: HRGMv2_1008_8_33
Type: TF
Location: 31006 - 32016 (+)
Gene ID: HRGMv2_1008_8_34
Type: TC
Location: 32274 - 34034 (-)
Gene ID: HRGMv2_1008_8_35
Type: CAZyme
Location: 34211 - 35653 (-)
Gene ID: HRGMv2_1008_8_36
Type: TF
Location: 35995 - 37032 (+)
Gene ID: HRGMv2_1008_8_37
Type: CAZyme
Location: 37300 - 38739 (-)
Gene ID: HRGMv2_1008_8_38
Type: TC
Location: 38806 - 40581 (-)
Gene ID: HRGMv2_1008_8_39
Type: TF
Location: 40939 - 41943 (+)
Gene ID: HRGMv2_1008_8_40
Type: TC
Location: 42158 - 42496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List