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Cluster: HRGMv2_1008_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1008_8 HRGMv2_1008_8_9 8727 9170 + 4.A.6.1.16
pfam HRGMv2_1008_8 HRGMv2_1008_8_10 9170 9451 + YajC
TC HRGMv2_1008_8 HRGMv2_1008_8_11 9488 9970 + 4.A.6.1.4
TC HRGMv2_1008_8 HRGMv2_1008_8_12 10061 10861 + 4.A.6.1.4
TC HRGMv2_1008_8 HRGMv2_1008_8_13 10851 11933 + 4.A.6.1.4
TF HRGMv2_1008_8 HRGMv2_1008_8_14 12119 12850 + GntR
STP HRGMv2_1008_8 HRGMv2_1008_8_15 12965 14131 + SIS | SIS
CAZyme HRGMv2_1008_8 HRGMv2_1008_8_16 14251 15420 + CE9
Gene ID: HRGMv2_1008_8_9
Type: TC
Location: 8727 - 9170 (+)
Gene ID: HRGMv2_1008_8_10
Type: pfam
Location: 9170 - 9451 (+)
Gene ID: HRGMv2_1008_8_11
Type: TC
Location: 9488 - 9970 (+)
Gene ID: HRGMv2_1008_8_12
Type: TC
Location: 10061 - 10861 (+)
Gene ID: HRGMv2_1008_8_13
Type: TC
Location: 10851 - 11933 (+)
Gene ID: HRGMv2_1008_8_14
Type: TF
Location: 12119 - 12850 (+)
Gene ID: HRGMv2_1008_8_15
Type: STP
Location: 12965 - 14131 (+)
Gene ID: HRGMv2_1008_8_16
Type: CAZyme
Location: 14251 - 15420 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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