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Cluster: HRGMv2_1008_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1008_17 HRGMv2_1008_17_10 13588 15270 + 2.A.66.4.4
pfam HRGMv2_1008_17 HRGMv2_1008_17_11 15277 17217 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1008_17 HRGMv2_1008_17_12 17583 19196 + 3.A.1.5.27
TC HRGMv2_1008_17 HRGMv2_1008_17_13 19354 20310 + 3.A.1.5.38
TC HRGMv2_1008_17 HRGMv2_1008_17_14 20314 22329 + 3.A.1.5.25
TC HRGMv2_1008_17 HRGMv2_1008_17_15 22330 23157 + 3.A.1.5.27
CAZyme HRGMv2_1008_17 HRGMv2_1008_17_16 23331 24215 + CE7
Gene ID: HRGMv2_1008_17_10
Type: TC
Location: 13588 - 15270 (+)
Gene ID: HRGMv2_1008_17_11
Type: pfam
Location: 15277 - 17217 (+)
Gene ID: HRGMv2_1008_17_12
Type: TC
Location: 17583 - 19196 (+)
Gene ID: HRGMv2_1008_17_13
Type: TC
Location: 19354 - 20310 (+)
Gene ID: HRGMv2_1008_17_14
Type: TC
Location: 20314 - 22329 (+)
Gene ID: HRGMv2_1008_17_15
Type: TC
Location: 22330 - 23157 (+)
Gene ID: HRGMv2_1008_17_16
Type: CAZyme
Location: 23331 - 24215 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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