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Cluster: HRGMv2_1007_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1007_11 HRGMv2_1007_11_19 16611 17147 - 4.A.1.2.6
CAZyme HRGMv2_1007_11 HRGMv2_1007_11_20 17298 18746 - GH1
TF HRGMv2_1007_11 HRGMv2_1007_11_21 18920 19927 - HTH_AraC
CAZyme HRGMv2_1007_11 HRGMv2_1007_11_22 20044 22614 + GH106
TF HRGMv2_1007_11 HRGMv2_1007_11_23 22658 23512 + HTH_6
STP HRGMv2_1007_11 HRGMv2_1007_11_24 23782 24462 - Pribosyltran
TC HRGMv2_1007_11 HRGMv2_1007_11_25 24899 27667 + 3.A.3.4.1
Gene ID: HRGMv2_1007_11_19
Type: TC
Location: 16611 - 17147 (-)
Gene ID: HRGMv2_1007_11_20
Type: CAZyme
Location: 17298 - 18746 (-)
Gene ID: HRGMv2_1007_11_21
Type: TF
Location: 18920 - 19927 (-)
Gene ID: HRGMv2_1007_11_22
Type: CAZyme
Location: 20044 - 22614 (+)
Gene ID: HRGMv2_1007_11_23
Type: TF
Location: 22658 - 23512 (+)
Gene ID: HRGMv2_1007_11_24
Type: STP
Location: 23782 - 24462 (-)
Gene ID: HRGMv2_1007_11_25
Type: TC
Location: 24899 - 27667 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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