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Cluster: HRGMv2_1007_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1007_1 HRGMv2_1007_1_92 94187 95563 - GH13_20
TC HRGMv2_1007_1 HRGMv2_1007_1_93 95717 96913 - 2.A.1.2.18
TC HRGMv2_1007_1 HRGMv2_1007_1_94 97034 99394 - 9.A.8.1.6
peptidase HRGMv2_1007_1 HRGMv2_1007_1_95 99579 100481 - S09.UPW
TC HRGMv2_1007_1 HRGMv2_1007_1_96 100726 101289 + 4.A.1.2.6
pfam HRGMv2_1007_1 HRGMv2_1007_1_97 101471 102874 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1007_1 HRGMv2_1007_1_98 103135 103920 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1007_1 HRGMv2_1007_1_99 104081 105061 + 3.A.1.34.1
TC HRGMv2_1007_1 HRGMv2_1007_1_100 105266 106189 + 3.A.1.34.1
TC HRGMv2_1007_1 HRGMv2_1007_1_101 106182 106976 + 3.A.1.34.1
Gene ID: HRGMv2_1007_1_92
Type: CAZyme
Location: 94187 - 95563 (-)
Gene ID: HRGMv2_1007_1_93
Type: TC
Location: 95717 - 96913 (-)
Gene ID: HRGMv2_1007_1_94
Type: TC
Location: 97034 - 99394 (-)
Gene ID: HRGMv2_1007_1_95
Type: peptidase
Location: 99579 - 100481 (-)
Gene ID: HRGMv2_1007_1_96
Type: TC
Location: 100726 - 101289 (+)
Gene ID: HRGMv2_1007_1_97
Type: pfam
Location: 101471 - 102874 (+)
Gene ID: HRGMv2_1007_1_98
Type:
Location: 103135 - 103920 (+)
Gene ID: HRGMv2_1007_1_99
Type: TC
Location: 104081 - 105061 (+)
Gene ID: HRGMv2_1007_1_100
Type: TC
Location: 105266 - 106189 (+)
Gene ID: HRGMv2_1007_1_101
Type: TC
Location: 106182 - 106976 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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