dbCAN Logo

Cluster: HRGMv2_1004_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1004_17 HRGMv2_1004_17_17 17365 18291 - CE7
TC HRGMv2_1004_17 HRGMv2_1004_17_18 18423 19250 - 3.A.1.5.27
TC HRGMv2_1004_17 HRGMv2_1004_17_19 19251 21266 - 3.A.1.5.25
TC HRGMv2_1004_17 HRGMv2_1004_17_20 21270 22226 - 3.A.1.5.38
TC HRGMv2_1004_17 HRGMv2_1004_17_21 22384 23997 - 3.A.1.5.27
pfam HRGMv2_1004_17 HRGMv2_1004_17_22 24362 26302 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1004_17 HRGMv2_1004_17_23 26309 27991 - 2.A.66.4.4
Gene ID: HRGMv2_1004_17_17
Type: CAZyme
Location: 17365 - 18291 (-)
Gene ID: HRGMv2_1004_17_18
Type: TC
Location: 18423 - 19250 (-)
Gene ID: HRGMv2_1004_17_19
Type: TC
Location: 19251 - 21266 (-)
Gene ID: HRGMv2_1004_17_20
Type: TC
Location: 21270 - 22226 (-)
Gene ID: HRGMv2_1004_17_21
Type: TC
Location: 22384 - 23997 (-)
Gene ID: HRGMv2_1004_17_22
Type: pfam
Location: 24362 - 26302 (-)
Gene ID: HRGMv2_1004_17_23
Type: TC
Location: 26309 - 27991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List