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Cluster: HRGMv2_1004_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1004_5 HRGMv2_1004_5_34 40628 41941 + 4.A.3.2.8
TC HRGMv2_1004_5 HRGMv2_1004_5_35 42032 42361 + 4.A.3.2.8
CAZyme HRGMv2_1004_5 HRGMv2_1004_5_36 42444 43982 + GH1
TC HRGMv2_1004_5 HRGMv2_1004_5_37 44061 44333 + 8.A.8.1.6
NULL(UNKNOWN) HRGMv2_1004_5 HRGMv2_1004_5_38 44425 44814 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1004_5 HRGMv2_1004_5_39 44901 46757 - 3.A.1.135.6
TC HRGMv2_1004_5 HRGMv2_1004_5_40 46757 49126 - 3.A.1.135.6
Gene ID: HRGMv2_1004_5_34
Type: TC
Location: 40628 - 41941 (+)
Gene ID: HRGMv2_1004_5_35
Type: TC
Location: 42032 - 42361 (+)
Gene ID: HRGMv2_1004_5_36
Type: CAZyme
Location: 42444 - 43982 (+)
Gene ID: HRGMv2_1004_5_37
Type: TC
Location: 44061 - 44333 (+)
Gene ID: HRGMv2_1004_5_38
Type:
Location: 44425 - 44814 (+)
Gene ID: HRGMv2_1004_5_39
Type: TC
Location: 44901 - 46757 (-)
Gene ID: HRGMv2_1004_5_40
Type: TC
Location: 46757 - 49126 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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