dbCAN Logo

Cluster: HRGMv2_1004_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1004_28 HRGMv2_1004_28_5 3468 3911 + 4.A.6.1.16
pfam HRGMv2_1004_28 HRGMv2_1004_28_6 3911 4192 + YajC
TC HRGMv2_1004_28 HRGMv2_1004_28_7 4229 4711 + 4.A.6.1.4
TC HRGMv2_1004_28 HRGMv2_1004_28_8 4802 5602 + 4.A.6.1.4
TC HRGMv2_1004_28 HRGMv2_1004_28_9 5592 6674 + 4.A.6.1.4
TF HRGMv2_1004_28 HRGMv2_1004_28_10 6859 7590 + GntR
STP HRGMv2_1004_28 HRGMv2_1004_28_11 7705 8871 + SIS | SIS
CAZyme HRGMv2_1004_28 HRGMv2_1004_28_12 8989 10158 + CE9
Gene ID: HRGMv2_1004_28_5
Type: TC
Location: 3468 - 3911 (+)
Gene ID: HRGMv2_1004_28_6
Type: pfam
Location: 3911 - 4192 (+)
Gene ID: HRGMv2_1004_28_7
Type: TC
Location: 4229 - 4711 (+)
Gene ID: HRGMv2_1004_28_8
Type: TC
Location: 4802 - 5602 (+)
Gene ID: HRGMv2_1004_28_9
Type: TC
Location: 5592 - 6674 (+)
Gene ID: HRGMv2_1004_28_10
Type: TF
Location: 6859 - 7590 (+)
Gene ID: HRGMv2_1004_28_11
Type: STP
Location: 7705 - 8871 (+)
Gene ID: HRGMv2_1004_28_12
Type: CAZyme
Location: 8989 - 10158 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List