dbCAN Logo

Cluster: HRGMv2_1004_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1004_25 HRGMv2_1004_25_3 2916 4421 + GH77
CAZyme HRGMv2_1004_25 HRGMv2_1004_25_4 4550 6817 + GT35
TC HRGMv2_1004_25 HRGMv2_1004_25_5 7274 8473 - 3.A.1.1.22
TC HRGMv2_1004_25 HRGMv2_1004_25_6 8542 9381 - 3.A.1.1.45
TC HRGMv2_1004_25 HRGMv2_1004_25_7 9381 10235 - 3.A.1.1.45
TC HRGMv2_1004_25 HRGMv2_1004_25_8 10323 11639 - 3.A.1.1.45
TF HRGMv2_1004_25 HRGMv2_1004_25_9 11946 12665 - GntR
TC HRGMv2_1004_25 HRGMv2_1004_25_10 12895 15348 + 4.A.1.1.8
Gene ID: HRGMv2_1004_25_3
Type: CAZyme
Location: 2916 - 4421 (+)
Gene ID: HRGMv2_1004_25_4
Type: CAZyme
Location: 4550 - 6817 (+)
Gene ID: HRGMv2_1004_25_5
Type: TC
Location: 7274 - 8473 (-)
Gene ID: HRGMv2_1004_25_6
Type: TC
Location: 8542 - 9381 (-)
Gene ID: HRGMv2_1004_25_7
Type: TC
Location: 9381 - 10235 (-)
Gene ID: HRGMv2_1004_25_8
Type: TC
Location: 10323 - 11639 (-)
Gene ID: HRGMv2_1004_25_9
Type: TF
Location: 11946 - 12665 (-)
Gene ID: HRGMv2_1004_25_10
Type: TC
Location: 12895 - 15348 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List