dbCAN Logo

Cluster: HRGMv2_1003_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1003_3 HRGMv2_1003_3_78 79554 81896 - 3.A.3.5.15
STP HRGMv2_1003_3 HRGMv2_1003_3_79 82311 84395 - Pkinase
STP HRGMv2_1003_3 HRGMv2_1003_3_80 84566 85528 - FHA
TC HRGMv2_1003_3 HRGMv2_1003_3_81 86036 88279 + 1.I.1.1.3
STP HRGMv2_1003_3 HRGMv2_1003_3_82 88901 89662 + Fer4
TC HRGMv2_1003_3 HRGMv2_1003_3_83 90006 90518 + 4.A.1.2.5
pfam HRGMv2_1003_3 HRGMv2_1003_3_84 90525 91391 + PRD | PRD | CAT_RBD
TC HRGMv2_1003_3 HRGMv2_1003_3_85 91491 93107 + 4.A.1.1.3
CAZyme HRGMv2_1003_3 HRGMv2_1003_3_86 93111 94493 + GH4
Gene ID: HRGMv2_1003_3_78
Type: TC
Location: 79554 - 81896 (-)
Gene ID: HRGMv2_1003_3_79
Type: STP
Location: 82311 - 84395 (-)
Gene ID: HRGMv2_1003_3_80
Type: STP
Location: 84566 - 85528 (-)
Gene ID: HRGMv2_1003_3_81
Type: TC
Location: 86036 - 88279 (+)
Gene ID: HRGMv2_1003_3_82
Type: STP
Location: 88901 - 89662 (+)
Gene ID: HRGMv2_1003_3_83
Type: TC
Location: 90006 - 90518 (+)
Gene ID: HRGMv2_1003_3_84
Type: pfam
Location: 90525 - 91391 (+)
Gene ID: HRGMv2_1003_3_85
Type: TC
Location: 91491 - 93107 (+)
Gene ID: HRGMv2_1003_3_86
Type: CAZyme
Location: 93111 - 94493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List