dbCAN Logo

Cluster: HRGMv2_1003_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1003_1 HRGMv2_1003_1_134 138308 139813 + GH77
CAZyme HRGMv2_1003_1 HRGMv2_1003_1_135 139942 142209 + GT35
TC HRGMv2_1003_1 HRGMv2_1003_1_136 142667 143866 - 3.A.1.1.22
TC HRGMv2_1003_1 HRGMv2_1003_1_137 143935 144774 - 3.A.1.1.45
TC HRGMv2_1003_1 HRGMv2_1003_1_138 144774 145628 - 3.A.1.1.45
TC HRGMv2_1003_1 HRGMv2_1003_1_139 145716 147032 - 3.A.1.1.45
TF HRGMv2_1003_1 HRGMv2_1003_1_140 147339 148058 - GntR
NULL(UNKNOWN) HRGMv2_1003_1 HRGMv2_1003_1_141 148145 148261 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1003_1 HRGMv2_1003_1_142 148283 150733 + 4.A.1.1.8
Gene ID: HRGMv2_1003_1_134
Type: CAZyme
Location: 138308 - 139813 (+)
Gene ID: HRGMv2_1003_1_135
Type: CAZyme
Location: 139942 - 142209 (+)
Gene ID: HRGMv2_1003_1_136
Type: TC
Location: 142667 - 143866 (-)
Gene ID: HRGMv2_1003_1_137
Type: TC
Location: 143935 - 144774 (-)
Gene ID: HRGMv2_1003_1_138
Type: TC
Location: 144774 - 145628 (-)
Gene ID: HRGMv2_1003_1_139
Type: TC
Location: 145716 - 147032 (-)
Gene ID: HRGMv2_1003_1_140
Type: TF
Location: 147339 - 148058 (-)
Gene ID: HRGMv2_1003_1_141
Type:
Location: 148145 - 148261 (-)
Gene ID: HRGMv2_1003_1_142
Type: TC
Location: 148283 - 150733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List