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Cluster: HRGMv2_1002_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1002_13 HRGMv2_1002_13_10 13632 15314 + 2.A.66.4.4
pfam HRGMv2_1002_13 HRGMv2_1002_13_11 15321 17261 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1002_13 HRGMv2_1002_13_12 17627 19240 + 3.A.1.5.27
TC HRGMv2_1002_13 HRGMv2_1002_13_13 19398 20354 + 3.A.1.5.38
TC HRGMv2_1002_13 HRGMv2_1002_13_14 20358 22373 + 3.A.1.5.25
TC HRGMv2_1002_13 HRGMv2_1002_13_15 22374 23201 + 3.A.1.5.27
CAZyme HRGMv2_1002_13 HRGMv2_1002_13_16 23333 24259 + CE7
Gene ID: HRGMv2_1002_13_10
Type: TC
Location: 13632 - 15314 (+)
Gene ID: HRGMv2_1002_13_11
Type: pfam
Location: 15321 - 17261 (+)
Gene ID: HRGMv2_1002_13_12
Type: TC
Location: 17627 - 19240 (+)
Gene ID: HRGMv2_1002_13_13
Type: TC
Location: 19398 - 20354 (+)
Gene ID: HRGMv2_1002_13_14
Type: TC
Location: 20358 - 22373 (+)
Gene ID: HRGMv2_1002_13_15
Type: TC
Location: 22374 - 23201 (+)
Gene ID: HRGMv2_1002_13_16
Type: CAZyme
Location: 23333 - 24259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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