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Cluster: HRGMv2_1002_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1002_41 HRGMv2_1002_41_6 5555 6604 - GT2
CAZyme HRGMv2_1002_41 HRGMv2_1002_41_7 6633 7487 - GT8
CAZyme HRGMv2_1002_41 HRGMv2_1002_41_8 7489 8286 - GT32
pfam HRGMv2_1002_41 HRGMv2_1002_41_9 8316 9410 - EpsG
CAZyme HRGMv2_1002_41 HRGMv2_1002_41_10 9463 10608 - GT4
CAZyme HRGMv2_1002_41 HRGMv2_1002_41_11 10681 11700 - GT2
CAZyme HRGMv2_1002_41 HRGMv2_1002_41_12 11693 12592 - GT2
TC HRGMv2_1002_41 HRGMv2_1002_41_13 12589 13404 - 9.B.18.1.2
Gene ID: HRGMv2_1002_41_6
Type: CAZyme
Location: 5555 - 6604 (-)
Gene ID: HRGMv2_1002_41_7
Type: CAZyme
Location: 6633 - 7487 (-)
Gene ID: HRGMv2_1002_41_8
Type: CAZyme
Location: 7489 - 8286 (-)
Gene ID: HRGMv2_1002_41_9
Type: pfam
Location: 8316 - 9410 (-)
Gene ID: HRGMv2_1002_41_10
Type: CAZyme
Location: 9463 - 10608 (-)
Gene ID: HRGMv2_1002_41_11
Type: CAZyme
Location: 10681 - 11700 (-)
Gene ID: HRGMv2_1002_41_12
Type: CAZyme
Location: 11693 - 12592 (-)
Gene ID: HRGMv2_1002_41_13
Type: TC
Location: 12589 - 13404 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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