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Cluster: HRGMv2_1000_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1000_21 HRGMv2_1000_21_13 11502 13007 + GH77
CAZyme HRGMv2_1000_21 HRGMv2_1000_21_14 13137 15404 + GT35
TC HRGMv2_1000_21 HRGMv2_1000_21_15 15939 17138 - 3.A.1.1.22
TC HRGMv2_1000_21 HRGMv2_1000_21_16 17207 18046 - 3.A.1.1.45
TC HRGMv2_1000_21 HRGMv2_1000_21_17 18046 18900 - 3.A.1.1.45
TC HRGMv2_1000_21 HRGMv2_1000_21_18 18988 20304 - 3.A.1.1.45
TF HRGMv2_1000_21 HRGMv2_1000_21_19 20611 21330 - GntR
TC HRGMv2_1000_21 HRGMv2_1000_21_20 21558 24011 + 4.A.1.1.8
Gene ID: HRGMv2_1000_21_13
Type: CAZyme
Location: 11502 - 13007 (+)
Gene ID: HRGMv2_1000_21_14
Type: CAZyme
Location: 13137 - 15404 (+)
Gene ID: HRGMv2_1000_21_15
Type: TC
Location: 15939 - 17138 (-)
Gene ID: HRGMv2_1000_21_16
Type: TC
Location: 17207 - 18046 (-)
Gene ID: HRGMv2_1000_21_17
Type: TC
Location: 18046 - 18900 (-)
Gene ID: HRGMv2_1000_21_18
Type: TC
Location: 18988 - 20304 (-)
Gene ID: HRGMv2_1000_21_19
Type: TF
Location: 20611 - 21330 (-)
Gene ID: HRGMv2_1000_21_20
Type: TC
Location: 21558 - 24011 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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