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Cluster: HRGMv2_1000_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1000_17 HRGMv2_1000_17_26 29809 30345 - 4.A.1.2.6
CAZyme HRGMv2_1000_17 HRGMv2_1000_17_27 30497 31945 - GH1
TF HRGMv2_1000_17 HRGMv2_1000_17_28 32118 33125 - HTH_AraC
CAZyme HRGMv2_1000_17 HRGMv2_1000_17_29 33242 35812 + GH106
TF HRGMv2_1000_17 HRGMv2_1000_17_30 35855 36709 + HTH_6
STP HRGMv2_1000_17 HRGMv2_1000_17_31 37184 37867 - Pribosyltran
TC HRGMv2_1000_17 HRGMv2_1000_17_32 38305 41073 + 3.A.3.4.1
Gene ID: HRGMv2_1000_17_26
Type: TC
Location: 29809 - 30345 (-)
Gene ID: HRGMv2_1000_17_27
Type: CAZyme
Location: 30497 - 31945 (-)
Gene ID: HRGMv2_1000_17_28
Type: TF
Location: 32118 - 33125 (-)
Gene ID: HRGMv2_1000_17_29
Type: CAZyme
Location: 33242 - 35812 (+)
Gene ID: HRGMv2_1000_17_30
Type: TF
Location: 35855 - 36709 (+)
Gene ID: HRGMv2_1000_17_31
Type: STP
Location: 37184 - 37867 (-)
Gene ID: HRGMv2_1000_17_32
Type: TC
Location: 38305 - 41073 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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