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Cluster: HRGMv2_0996_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0996_8 HRGMv2_0996_8_28 35541 37217 + 3.A.1.5.35
TC HRGMv2_0996_8 HRGMv2_0996_8_29 37374 38411 + 3.A.1.5.37
TC HRGMv2_0996_8 HRGMv2_0996_8_30 38426 39361 + 3.A.1.5.11
TC HRGMv2_0996_8 HRGMv2_0996_8_31 39364 40455 + 3.A.1.5.34
TC HRGMv2_0996_8 HRGMv2_0996_8_32 40455 41483 + 3.A.1.5.36
STP HRGMv2_0996_8 HRGMv2_0996_8_33 42227 44572 + GAF | SpoIIE
STP HRGMv2_0996_8 HRGMv2_0996_8_34 44651 45397 + STAS
CAZyme HRGMv2_0996_8 HRGMv2_0996_8_35 45891 47714 + GH13_30
Gene ID: HRGMv2_0996_8_28
Type: TC
Location: 35541 - 37217 (+)
Gene ID: HRGMv2_0996_8_29
Type: TC
Location: 37374 - 38411 (+)
Gene ID: HRGMv2_0996_8_30
Type: TC
Location: 38426 - 39361 (+)
Gene ID: HRGMv2_0996_8_31
Type: TC
Location: 39364 - 40455 (+)
Gene ID: HRGMv2_0996_8_32
Type: TC
Location: 40455 - 41483 (+)
Gene ID: HRGMv2_0996_8_33
Type: STP
Location: 42227 - 44572 (+)
Gene ID: HRGMv2_0996_8_34
Type: STP
Location: 44651 - 45397 (+)
Gene ID: HRGMv2_0996_8_35
Type: CAZyme
Location: 45891 - 47714 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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