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Cluster: HRGMv2_0996_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0996_2 HRGMv2_0996_2_102 115564 116358 - 3.A.1.34.1
TC HRGMv2_0996_2 HRGMv2_0996_2_103 116351 117274 - 3.A.1.34.1
TC HRGMv2_0996_2 HRGMv2_0996_2_104 117478 118458 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0996_2 HRGMv2_0996_2_105 118619 119404 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0996_2 HRGMv2_0996_2_106 119664 121067 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0996_2 HRGMv2_0996_2_107 121249 121812 - 4.A.1.2.6
peptidase HRGMv2_0996_2 HRGMv2_0996_2_108 122056 122955 + S09.UPW
TC HRGMv2_0996_2 HRGMv2_0996_2_109 123427 125787 + 9.A.8.1.6
TC HRGMv2_0996_2 HRGMv2_0996_2_110 125908 127104 + 2.A.1.2.18
CAZyme HRGMv2_0996_2 HRGMv2_0996_2_111 127258 128634 + GH13_20
Gene ID: HRGMv2_0996_2_102
Type: TC
Location: 115564 - 116358 (-)
Gene ID: HRGMv2_0996_2_103
Type: TC
Location: 116351 - 117274 (-)
Gene ID: HRGMv2_0996_2_104
Type: TC
Location: 117478 - 118458 (-)
Gene ID: HRGMv2_0996_2_105
Type:
Location: 118619 - 119404 (-)
Gene ID: HRGMv2_0996_2_106
Type: pfam
Location: 119664 - 121067 (-)
Gene ID: HRGMv2_0996_2_107
Type: TC
Location: 121249 - 121812 (-)
Gene ID: HRGMv2_0996_2_108
Type: peptidase
Location: 122056 - 122955 (+)
Gene ID: HRGMv2_0996_2_109
Type: TC
Location: 123427 - 125787 (+)
Gene ID: HRGMv2_0996_2_110
Type: TC
Location: 125908 - 127104 (+)
Gene ID: HRGMv2_0996_2_111
Type: CAZyme
Location: 127258 - 128634 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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